CDS

Accession Number TCMCG057C03364
gbkey CDS
Protein Id XP_018440500.1
Location complement(join(21325758..21325875,21325964..21326062,21326178..21326294,21326381..21326491,21326618..21326973,21327035..21327152,21327225..21327553))
Gene LOC108812670
GeneID 108812670
Organism Raphanus sativus

Protein

Length 415aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018584998.1
Definition PREDICTED: zinc finger protein VAR3, chloroplastic-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category S
Description zinc finger
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K14651        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03022        [VIEW IN KEGG]
ko05202        [VIEW IN KEGG]
map03022        [VIEW IN KEGG]
map05202        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009657        [VIEW IN EMBL-EBI]
GO:0009658        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016556        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1900865        [VIEW IN EMBL-EBI]
GO:1900871        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTTCTTCCAGAATCTTCCTAGTCGGAAACTCAATCTTCCGACCACAAAACCCCTCCTCCTTTCCACTCTCTCTCAATCGCTTCCCCTCTGTTTCTCTCAACCGCCTCCGCTGCTTCTCAAATGAAACCGCCACCGCCTCCGTGGATTCGGATTCTCCGTCTCCTCAATCTCCCCATCCATGGCCAGAGTGGATAAGCTTCGTCGACCGCCTGAAGACGAAGGGCTACTTCACCAAAAACATCGAAGACGACACCGTTTATCAAGAAATGAACGTTGTCAAGGACGCTTGTCTCAGCTTCGCTCGCGATCGCTACGACCTTCTTAGATCCTTGTCGTCGAGAGATATACAATCTCTCGTGGAGCGTGGTTGCCCTAATCTCTTTCGCAAAACAGTTAACTCATCCAAGAGGATTCGAGCTCATGTTAAACTAGATGAAGGAGATGTTTGTGGTTCTTGTGAGCTTCGTGGCACTTGTGATAGAGCTTACGTGATACTCAAGGACTCAGAAGCTGATGCTCGGACTGTTGATGTCATGCGTTTGCTACTGTTCAATGCGCTTGATTCTGTTGTTGTCTCTCGAGGAGAGATTTCGCCGGGGAGAGAGCTTGTTCATGAGTCTGCAAGAAGACTTCTTTTGGAGTTGCTTGAGCTCAGTGAGAAGCCTGTAAATCCTGTTTTGCCCAAACCTGCGGCGGCCAAGGTAGCGTTGCCTCCTAAGGAGAGAGTTTTTAAATCTAGGAGTGATGAGCCTCCTCAACGTGTTCGGTCTCAGTACAATGCAGACTGGGCGTGTCCTAAATGCGACTTTTTAAACTTTGCGAGAAATGAAAGATGCAGAGAGTGCAATGAAGTCGCTGACAGACGATCTGTTGCTGCTGTTGTCAAGGAAGGAGACTGGCTGTGTCCTGAGTGCAATTTCTCAAACTTCTCAAGAAACCAGAGCTGTCTGAAATGCAAAGCAAAGGGACCAAAGAGAAGTTCAATGGAGAATATTGAAATGAAAAAGGGAGACTGGAACTGCTCTGGGTGTGGATTCATGAACTTTTCTAGCAACAAAAAGTGTAAACAGTGTCGGGAACAACGTCCCCAAAGGCAGCTTGAGCCTGGAGAATGGGAATGTCCCTCATGCGACTTCTTGAACTATAGGAGAAACACTGTTTGCAAGAAGTGTGAGTGCAAACGACCTAGTGAATCCAACAACCATGAAGATGATCATTCATGGAAGCGGCCTGCCTTACTCTAA
Protein:  
MSSSRIFLVGNSIFRPQNPSSFPLSLNRFPSVSLNRLRCFSNETATASVDSDSPSPQSPHPWPEWISFVDRLKTKGYFTKNIEDDTVYQEMNVVKDACLSFARDRYDLLRSLSSRDIQSLVERGCPNLFRKTVNSSKRIRAHVKLDEGDVCGSCELRGTCDRAYVILKDSEADARTVDVMRLLLFNALDSVVVSRGEISPGRELVHESARRLLLELLELSEKPVNPVLPKPAAAKVALPPKERVFKSRSDEPPQRVRSQYNADWACPKCDFLNFARNERCRECNEVADRRSVAAVVKEGDWLCPECNFSNFSRNQSCLKCKAKGPKRSSMENIEMKKGDWNCSGCGFMNFSSNKKCKQCREQRPQRQLEPGEWECPSCDFLNYRRNTVCKKCECKRPSESNNHEDDHSWKRPALL